Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs10565130 chr6:133087375 CTTATTTAT/C 4.16E-9 255 32.45 31.57 9.93 KM Plot
SARC rs10717036 chr11:71211633 GA/G 1.94E-5 257 8.62 25.7 33.48 KM Plot
SARC rs10733598 chr9:115615329 G/A 6.78E-5 255 9.33 33.18 31.97 KM Plot
SARC rs10739376 chr9:115616775 A/T 7.16E-5 254 9.33 33.18 32.13 KM Plot
SARC rs10739378 chr9:115639631 C/T 8.05E-5 255 9.33 33.18 31.57 KM Plot
SARC rs10739379 chr9:115640976 C/G 7.32E-5 257 9.33 32.6 31.77 KM Plot
SARC rs10742330 chr11:34974493 T/C 4.26E-5 250 20.17 31.9 33.48 KM Plot
SARC rs10751102 chr11:71193657 A/G 2.68E-5 255 8.62 20.4 33.2 KM Plot
SARC rs10759603 chr9:115639581 C/G 8.05E-5 255 9.33 32.6 31.77 KM Plot
SARC rs10759604 chr9:115639748 G/A 8.05E-5 255 9.33 32.6 31.77 KM Plot
SARC rs10792743 chr11:71217006 A/G 1.81E-5 256 8.62 26.25 33.48 KM Plot
SARC rs10836323 chr11:34972842 A/G 6.29E-5 254 20.17 29.88 33.48 KM Plot
SARC rs10884748 chr10:111098397 A/G 1.33E-7 258 13.77 35.57 32.3 KM Plot
SARC rs10924806 chr1:246859420 C/T 5.0E-5 251 32.35 36.83 9.32 KM Plot
SARC rs10937776 chr4:7004495 A/G 7.49E-5 258 32.13 35.37 22.47 KM Plot